Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1317703	1317726	24	6 [0]	[0] 141	cld	regulator of length of O‑antigen component of lipopolysaccharide chains

AATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCG  >  minE/1317641‑1317702                                                              | aaTCCCCGCGCCAACCATGCCTCCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCg  <  1:2335168/62‑1 (MQ=255) aaTCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCg  <  1:20107/62‑1 (MQ=255) aaTCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCg  <  1:2340509/62‑1 (MQ=255) aaTCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCg  <  1:3637028/62‑1 (MQ=255) aaTCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCg  <  1:616178/62‑1 (MQ=255)  aTCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCg  <  1:2565290/61‑1 (MQ=255)                                                              | AATCCCCGCGCCAACCATGCCACCCAGCAGCACCGCCAGAATCAAGGTAATTGCCTTTTTCG  >  minE/1317641‑1317702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑