Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1411258	1411267	10	22 [0]	[0] 73	rsuA	16S rRNA pseudouridylate 516 synthase

GGCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAC  >  minE/1411197‑1411257                                                             | ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCTGTTAACGGAc  >  1:3383838/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:3132245/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:996181/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:993942/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:864727/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:3613195/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:3520495/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:3447696/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:3213911/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:319489/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:1176928/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:2918887/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:2859695/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:2787900/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:270823/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:2466923/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:2286864/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:2189506/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:2099859/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:1915633/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAc  >  1:1564909/1‑61 (MQ=255) ggCTCCTGAAAGTCATTGAAAAGTTAGACGACGATGGCAATTTCTTCTTCAGTTAACGGAc  >  1:714890/1‑61 (MQ=255)                                                             | GGCTCCTGAAAGTCATTGAAAAGTTAGACGACGCTGGCAATTTCTTCTTCAGTTAACGGAC  >  minE/1411197‑1411257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑