Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1449307	1449350	44	39 [0]	[0] 64	atoS	sensory histidine kinase in two‑component regulatory system with AtoC

CGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAG  >  minE/1449253‑1449306                                                      | cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3417497/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2963009/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3012405/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:302700/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3055128/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3062278/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3226098/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3291718/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3316302/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3320474/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2945859/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3424221/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:3452832/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:37658/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:478513/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:537717/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:838439/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:860517/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:877718/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:935957/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2275193/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1063301/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1127487/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1261048/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:171549/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1740079/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1875679/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1888737/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2052346/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1030191/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2337748/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2467661/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2499453/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2703889/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2705489/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2788062/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2818377/54‑1 (MQ=255) cGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:2907409/54‑1 (MQ=255)          tttCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAg  <  1:1624989/45‑1 (MQ=255)                                                      | CGATCCCTTTTTCACCACCAAAGCCTCAGGAACCGGGCTTGGTCTGGCGTTAAG  >  minE/1449253‑1449306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑