Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1485523	1485578	56	49 [0]	[1] 31	menF	isochorismate synthase 2

CCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAA  >  minE/1485468‑1485522                                                       | ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2635810/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:798999/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:76753/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:39269/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3586600/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3579194/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3516336/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2867484/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2826662/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2697282/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2498758/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2168335/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2162459/55‑1 (MQ=255) ccGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:203512/55‑1 (MQ=255)  cGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:202949/54‑1 (MQ=255)  cGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3179673/54‑1 (MQ=255)         tGGCTTTACCGCCACAGAGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1766450/47‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1391345/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3007750/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3166150/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3264732/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3446209/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1480789/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1430453/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2934631/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:3610950/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:386603/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1298055/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:676375/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:711957/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1292456/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:780429/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1169426/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2978070/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1577625/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2863409/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2862286/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1955591/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2681224/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1118206/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2605797/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:1992496/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2469955/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:237594/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2268737/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2193873/37‑1 (MQ=255)                   gCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2188627/37‑1 (MQ=255)                    ccACAGCGTCGCCATTCCAGGCGGTGTAAAAGTaaa  <  1:2032435/36‑1 (MQ=255)                     cacaGCGTCGCCATTCCAGGCGGGGTAAAAGTaaa  <  1:2566724/35‑1 (MQ=255)                                                       | CCGCAGCGTGGCTTTACCGCCACAGCGTCGCCATTCCAGGCGGGGTAAAAGTAAA  >  minE/1485468‑1485522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑