Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1528596	1528620	25	62 [0]	[0] 78	trmC	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme

GCCACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGA  >  minE/1528533‑1528595                                                               | gCCAC‑AAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1656215/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3256309/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2531307/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2569715/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2661756/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1159698/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2758022/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2881448/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3094390/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3161982/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3206287/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3210478/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3217974/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3218970/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3232641/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2754528/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3300131/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:337488/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3482777/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3563936/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:521242/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:540145/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:695952/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:760210/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:797432/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:985611/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:993005/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1180887/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1432332/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1464117/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1485770/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1665516/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1429219/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2516993/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1851910/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2116128/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:215846/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2172662/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1321081/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:129310/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2213876/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1255073/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:224640/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2277763/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2331678/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2484350/62‑1 (MQ=255)  ccACAAAATCCGGCGAATCAACATCATTGTAGTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3362995/62‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1354872/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:690662/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:582294/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1845533/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3634735/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1452956/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3526591/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:1694008/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2117756/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2176648/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2983295/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2829815/61‑1 (MQ=255)   cacaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:2563146/61‑1 (MQ=255)    acaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3220816/60‑1 (MQ=255)    acaAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGa  <  1:3030982/60‑1 (MQ=255)                                                               | GCCACAAAATCCGGCGAATCAACATCATTGTATTGGTGCCAGTTATCATCGCGGCAGCGAAGA  >  minE/1528533‑1528595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑