Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1537070	1537091	22	53 [0]	[0] 32	yfcS	predicted periplasmic pilus chaperone

GCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTGG  >  minE/1537008‑1537069                                                              | gCAGCTTGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:504059/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2966562/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2964224/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2980417/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3066020/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3119837/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3171821/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3391112/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3438675/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:349685/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3533309/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3534699/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:3584871/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:433583/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:436524/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:535134/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:574972/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:579128/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:639653/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:653234/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:693822/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:699019/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:7066/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:716043/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:771599/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:809809/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:860879/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2893449/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1077345/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1177880/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1202502/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:126028/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1387922/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1403613/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:145119/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1473003/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1555532/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1682640/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1757941/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1984318/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2051223/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2052700/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2316296/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2370436/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2554233/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:265337/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2665034/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:271548/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2793802/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2843545/62‑1 (MQ=255) gCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2852449/62‑1 (MQ=255)  cAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:1038481/61‑1 (MQ=255)                          cACTGGCGTTGCTGATAATCACGTAGTACGGCGTTgg  <  1:2037467/37‑1 (MQ=255)                                                              | GCAGCTGGATTACCGTTTTTCTGCGCACTGGCGTTGCTGATAATCACGTAGTACGGCGTTGG  >  minE/1537008‑1537069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑