Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1549964	1549980	17	13 [0]	[0] 14	vacJ	predicted lipoprotein

TAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAG  >  minE/1549917‑1549963                                               | tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:1196301/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:1310079/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:1867198/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:2218163/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:2222528/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:3053718/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:3222321/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:334296/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:529804/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:663975/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:665151/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:669487/1‑47 (MQ=255) tAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAg  >  1:745497/1‑47 (MQ=255)                                               | TAAAACCGCCCATCCCCAAAATGGTGTTCAGGAAAAAGCGGGTAAAG  >  minE/1549917‑1549963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑