Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1846366	1846367	2	38 [0]	[0] 63	iap	aminopeptidase in alkaline phosphatase isozyme conversion

TACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTC  >  minE/1846368‑1846429 |                                                              tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAg                          >  1:1595330/1‑38 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATAtt   >  1:2317121/1‑61 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3232388/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3601534/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3559639/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:355495/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3499181/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3496008/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3467549/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3380032/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:37527/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3171447/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3133490/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3059306/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:3042228/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2984028/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2961569/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2809564/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:415317/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:45373/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:477251/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:519946/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:531188/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:590208/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:615833/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:633295/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:682230/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:712854/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:81760/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:849658/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:947487/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:977992/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1954821/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1132220/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1217456/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:126144/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1366757/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1469276/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1503758/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1509605/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1532645/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1689236/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1697466/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1820842/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1867536/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1886374/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1935649/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2885242/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2022718/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2070859/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2095042/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:210645/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2168291/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2187238/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2197244/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2306059/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2541605/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2564989/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2659938/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2688604/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:2778776/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTc  >  1:1070608/1‑62 (MQ=255) tACTTTCTTTCCGGGACGCATGACCGGAACTCATGCAGAAATGTTATCTGCCGATTATATTc  >  1:931120/1‑62 (MQ=255) |                                                              TACTTTCTTTCCGGGACGCATGACCGGAACTCCTGCAGAAATGTTATCTGCCGATTATATTC  >  minE/1846368‑1846429

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑