Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1998321	1998389	69	96 [0]	[0] 25	pitB	phosphate transporter

CAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTC  >  minE/1998390‑1998451 |                                                              cagcagGTGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:2657176/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:3391033/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:842050/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:829083/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:739654/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:664846/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:634260/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:547208/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:529079/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:527895/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:499646/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:42158/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:389463/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:3465180/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:1174719/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:3174976/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:306082/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:2874663/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:2623267/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:2535958/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:2040903/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:167905/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:1389790/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:1352401/62‑1 (MQ=255) cagcagGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTc  <  1:1231957/62‑1 (MQ=255) |                                                              CAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTC  >  minE/1998390‑1998451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑