Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2110466	2110486	21	27 [0]	[0] 61	agaC	N‑acetylgalactosamine‑specific enzyme IIC component of PTS

AGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATGA  >  minE/2110487‑2110547 |                                                             aGTTTTTCAATGCGAAATCCCGGCTGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:472564/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCTGTAAAAATga  <  1:1356262/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTaa        >  1:1469447/1‑55 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2864586/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:3526497/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:3324881/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:3193225/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:3143195/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:3020718/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2929438/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:414907/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2825297/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2750526/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2688051/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:2628427/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2603323/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:1009257/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:387043/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2588014/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:464560/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:625407/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:702282/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:712752/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:724175/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:825686/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:82948/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:860682/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:877552/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:951430/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:953908/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:171654/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1044509/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1050381/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1161199/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1216676/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:122883/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1286408/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1411199/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:146036/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1484228/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1542175/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1634911/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1684735/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2576709/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2023277/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2481120/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:2432728/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2320602/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:2202539/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2197523/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2108503/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:2075460/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:1885847/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  >  1:184466/1‑61 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:1829532/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATga  <  1:1779746/61‑1 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATg   >  1:684761/1‑60 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATg   >  1:670567/1‑60 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATg   >  1:1493017/1‑60 (MQ=255) aGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCACGTTGCCAGTAAAAATga  >  1:3593050/1‑61 (MQ=255) aGTTTATCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAg                      >  1:2870532/1‑41 (MQ=255) |                                                             AGTTTTTCAATGCGAAATCCCGGCAGCAAGCGCAACCGCAGCCCGTTGCCAGTAAAAATGA  >  minE/2110487‑2110547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑