Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2133817	2133821	5	59 [0]	[0] 33	nlpI	conserved hypothetical protein

ATAAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACG  >  minE/2133822‑2133882 |                                                             ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAATGATTTGTTCCATACg  <  1:1651029/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2325539/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2290163/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2658143/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:272364/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2843538/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2924384/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:3007643/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:3045917/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:3050017/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:312598/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:3238910/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:3426530/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:3478682/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:3548923/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:501404/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:838275/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2296278/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1123860/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2276307/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:2274502/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1999832/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1861381/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1796075/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1783605/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1663471/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1639762/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1615702/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1611632/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1451001/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1347950/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1311567/61‑1 (MQ=255) ataAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACg  <  1:1144698/61‑1 (MQ=255) |                                                             ATAAAAGCTGTGCGCGTTCGTCATCGGTTAAAGCCCGACTGGCAAGGATTTGTTCCATACG  >  minE/2133822‑2133882

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑