Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2258409	2258414	6	41 [0]	[0] 47	rpoB	RNA polymerase, beta subunit

CTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTC  >  minE/2258415‑2258476 |                                                              cTTTCTCACCGAAGATCTCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3360695/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCATTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2874392/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGTTCAGCTGAGTTTCACCTTTc  <  1:2112185/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3035347/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2188484/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2314139/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2338628/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2625236/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2764315/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2797372/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2825326/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2976970/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2981216/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:645552/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3070518/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3168032/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3288047/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3351228/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3424077/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3452020/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:3575019/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:626074/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:634288/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1040598/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1739449/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1044772/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1092368/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1092544/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1122500/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1212899/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1238738/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1359268/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1425581/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1451493/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1536668/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2093500/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1764834/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1814270/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1851555/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1863122/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1867201/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1925309/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:1967703/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2006378/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:202780/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTc  <  1:2093240/62‑1 (MQ=255) cTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACATTTc  <  1:544961/62‑1 (MQ=255) |                                                              CTTTCTCACCGAAGATCGCACGCAGCAGTTTTTCTTCTGGGGTCAGCTGAGTTTCACCTTTC  >  minE/2258415‑2258476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑