Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2280079	2280091	13	52 [0]	[0] 61	trmA	tRNA (uracil‑5‑)‑methyltransferase

CCGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGC  >  minE/2280092‑2280153 |                                                              ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGaaa         >  1:1887170/1‑54 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCt     >  1:1978135/1‑59 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTgg   >  1:226555/1‑61 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2663778/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2698624/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:294312/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3079098/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3156901/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2527933/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3173703/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3421450/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3432067/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3439836/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:354266/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2535059/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3590752/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2495142/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:3615575/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:43014/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:532167/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:595817/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:638708/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:647137/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:688582/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:771254/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:812251/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:856048/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:865359/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:877617/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:893232/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:950055/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:971296/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1846092/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1199342/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1200676/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1259893/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:135118/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1424025/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1433236/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:144292/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1551933/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1579767/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:162799/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1665364/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1706346/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1720151/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2517926/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:188062/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1896400/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:201301/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2063034/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2137009/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2142965/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2157539/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2291291/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2298155/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2368961/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:2413570/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:241715/1‑62 (MQ=255) ccGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:1124068/1‑62 (MQ=255) ccGGAAACGGTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGc  >  1:510521/1‑62 (MQ=255) |                                                              CCGGAAACGTTATGCAAGAATCTGGAAACATTAAGCCAGACGCACAAGGTCGAACGTCTGGC  >  minE/2280092‑2280153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑