Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2296808	2296833	26	12 [0]	[0] 57	katG	catalase/hydroperoxidase HPI(I)

GCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGAA  >  minE/2296834‑2296894 |                                                             gCGTCAGTTTGAACCAGGCACGGGTAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3512328/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTg                         >  1:3348109/1‑38 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3612856/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2965616/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3014449/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3031317/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3064932/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3174/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3189940/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:337221/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3426914/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3453887/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3530274/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3537380/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3602127/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2958795/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3629663/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:3638694/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:394506/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:469482/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:561489/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:753179/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:778751/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:780160/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:783973/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:824194/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:824238/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:833683/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:866695/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:201814/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1029824/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1039723/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1064183/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1129149/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1133167/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1147438/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1252811/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1348230/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1442779/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1445532/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1561371/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1859006/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:1014796/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2094379/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2134120/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2212434/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2216534/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2311356/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:231584/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2440920/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2469793/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:278989/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:285653/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2877401/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2939180/1‑61 (MQ=255) gCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGATGAGGa   >  1:1975929/1‑60 (MQ=255) gCGTCAGTTAGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGaa  >  1:2099384/1‑61 (MQ=255) |                                                             GCGTCAGTTTGAACCAGGCACGGGCAAAGGCTTCGTTGAACGCCTGCGGATCGTTGAGGAA  >  minE/2296834‑2296894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑