Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2343759	2343766	8	9 [0]	[0] 63	glnG	fused DNA‑binding response regulator in two‑component regulatory system with GlnL, nitrogen regulator I (NRI)

CCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTG  >  minE/2343767‑2343826 |                                                            ccagccaTGCAGGTCGTGTTCCGTATTATCGGTCGGCTTTcgcg                  >  1:580429/1‑44 (MQ=255) ccagccaTGCAGGCCGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1882435/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTcgc                   >  1:3228413/1‑43 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGttc               >  1:1467246/1‑47 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGtt                >  1:487005/1‑46 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGt   >  1:2940288/1‑59 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3557345/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:502115/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:443452/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:417193/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3619745/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3584426/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:553643/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3553269/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3506294/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:320493/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:320273/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3173276/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:50637/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:543461/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3146094/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:586862/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:587425/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:618886/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:639807/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:683469/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:694346/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:695569/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:771663/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:805268/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:881123/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:912861/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:997939/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1146348/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1160045/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1186294/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1292811/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1412014/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1510192/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1591319/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1692554/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1698788/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1751218/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1752129/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1880538/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:1886516/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2067252/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2148390/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:229145/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2309520/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2313628/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2330868/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2435294/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2507408/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2634346/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2698402/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2799785/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:2839740/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3012144/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3018650/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTg  >  1:3166292/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCAATTAGCGTg  >  1:3861/1‑60 (MQ=255) ccagccaTGCAGGACGTGTTCCGTATTATCGGTCGGATTTCGCGTTCTTCTATTAGCGTg  >  1:22267/1‑60 (MQ=255) |                                                            CCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCTTCTATTAGCGTG  >  minE/2343767‑2343826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑