Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2398906	2398916	11	68 [0]	[0] 41	uvrD	DNA‑dependent ATPase I and helicase II

TAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATCC  >  minE/2398917‑2398978 |                                                              tAAACACCTGCGGGAACTCCAGGCCTTTCGCCTAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:2873738/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGATTGTAGCGTCATCAACTGCACCGCATcc  >  1:2339818/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGc                       >  1:2963189/1‑41 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3327748/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3002207/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3080585/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3127471/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3140456/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3153657/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3267969/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3294950/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:2287267/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:347619/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:3539885/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:36280/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:374242/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:528770/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:648024/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:673223/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:762261/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:887963/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1790031/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1128989/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1131583/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1163714/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1283206/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1305098/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1409989/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1503938/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1574800/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1577850/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1020409/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1804915/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1890095/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1894807/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:1904859/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:20394/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:2162768/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:2237331/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:2241652/1‑62 (MQ=255) tAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATcc  >  1:2243462/1‑62 (MQ=255) |                                                              TAAACACCTGCGGGAACTCCAGGCCTTTCGCCGAGTGTAGCGTCATCAACTGCACCGCATCC  >  minE/2398917‑2398978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑