Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2464120	2464136	17	6 [0]	[0] 43	atpI	ATP synthase, membrane‑bound accesory subunit

CAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTGG  >  minE/2464137‑2464186 |                                                  cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCTTTTgg  <  1:3189309/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:360733/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:292523/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3007846/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3009075/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3095089/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3138501/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3514695/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3528561/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3553914/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:3561508/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2763535/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:393639/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:536460/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:570901/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:61135/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:6327/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:792802/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:852749/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:914342/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:984910/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:199159/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:116525/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1235823/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1314965/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1342440/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1373764/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1570376/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:178897/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1796945/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1826747/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:1134002/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2075599/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2138793/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2336737/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2351295/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2367069/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2422684/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:243129/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2472925/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2548437/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTgg  <  1:2553893/50‑1 (MQ=255) cAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTAGCATTTgg  <  1:516230/50‑1 (MQ=255) |                                                  CAGGCGCATACACCAGCGAAAGGCCGGGTGGCCTGGACATTCGCATTTGG  >  minE/2464137‑2464186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑