Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2538475	2538478	4	5 [0]	[0] 61	rfaI	UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase

AGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTG  >  minE/2538479‑2538540 |                                                              aGTAGAAACAGATAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2905140/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTTGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:916942/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCt       >  1:2951327/1‑57 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTAttt   >  1:337385/1‑61 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTAttt   >  1:2960479/1‑61 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTAttt   >  1:2963505/1‑61 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTAtt    >  1:2235394/1‑60 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3005646/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3012095/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3061455/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3141529/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3145991/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3243394/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3260520/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:294384/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3261112/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3285235/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3280965/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2872970/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3378440/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3445966/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3474111/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3574586/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:3647136/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:372542/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:567693/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:594173/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:733861/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:740069/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:797327/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:977491/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1912973/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1023034/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1038050/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1145513/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1161466/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1169917/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1337686/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1393903/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1621063/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1644729/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1708728/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1778175/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1831267/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1887627/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1004738/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:1980261/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:223431/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2289691/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2300816/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2441995/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2483149/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2504291/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2580215/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2627361/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2670038/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2696837/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2718520/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2811746/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:2852577/1‑62 (MQ=255) aGTAGAAACAGAAAATCTTTGTCTGGACATAGCTTATGGAACTGACAAAAACTTTCTATTTg  >  1:639439/1‑62 (MQ=255) |                                                              AGTAGAAACAGAAAATCTTTGTCTGGACATCGCTTATGGAACTGACAAAAACTTTCTATTTG  >  minE/2538479‑2538540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑