Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2554409	2554423	15	99 [0]	[0] 40	envC	protease with a role in cell division

CCTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCGCGCGC  >  minE/2554424‑2554485 |                                                              ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGc                    >  1:3421696/1‑44 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCt                   >  1:1548171/1‑45 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACcgcgcg   >  1:2473230/1‑61 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:3484042/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:2627284/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:281225/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:3052613/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:3100911/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:316881/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:344200/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:3451266/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:3473610/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:999495/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:356204/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:484832/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:592639/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:636699/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:824552/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:882073/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:959534/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1008027/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1716077/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1198450/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1263168/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:127187/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1574415/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:162013/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:163051/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:168957/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1711915/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:2451433/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:178040/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1868205/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:2184756/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:2188576/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:2344732/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:2376691/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:2419000/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGCTGCTTTTGGCGTACCgcgcgc  >  1:459970/1‑62 (MQ=255) ccTGCTTTTTCAATTGTGCGAGCAGGCTCGCGCGTTGTTGTTGCTTTTGGCGTACCgcgcgc  >  1:1841724/1‑62 (MQ=255) |                                                              CCTGCTTTTTCAATTGTGCGAGCAGGCTTGCGCGTTGTTGTTGCTTTTGGCGTACCGCGCGC  >  minE/2554424‑2554485

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑