Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2798448	2798461	14	44 [0]	[0] 44	zur	DNA‑binding transcriptional activator, Zn(II)‑binding

GCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTC  >  minE/2798462‑2798523 |                                                              gCTTCAATCACATTATGCCGCAGGGCAATCCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2227771/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAACCCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2567184/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGt   >  1:3619295/1‑61 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGt   >  1:2321864/1‑61 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGt   >  1:1193980/1‑61 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2934988/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1028249/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2354833/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:892030/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:252896/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:784718/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2764107/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2827728/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2828531/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:70507/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:3128741/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:3301598/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:896049/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:3627821/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:442045/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:753706/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:498625/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:528538/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1361931/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1037362/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1039047/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1065507/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:109048/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1101405/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1115085/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1184277/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1254428/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1328462/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2316223/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1730997/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1788329/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:1801845/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2027752/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:207945/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2143209/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2211849/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATATc  >  1:3371528/1‑62 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAACACCATTTTTGCCGCCAGCGTATGCATAATGt   >  1:66778/1‑61 (MQ=255) gCTTCAATCACATTATGCCGCAGGGCAAAACCCATTTTTGCCGCCAGCGTATGCATAATGTc  >  1:2138128/1‑62 (MQ=255) |                                                              GCTTCAATCACATTATGCCGCAGGGCAAACCCCATTTTTGCCGCCAGCGTATGCATAATGTC  >  minE/2798462‑2798523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑