Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2945956	2945985	30	90 [0]	[0] 98	fecI	RNA polymerase, sigma 19 factor

GTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCG  >  minE/2945986‑2946045 |                                                            gTGAAGGCGCTCCCCCCTCCGTCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:917885/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCTTAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2491012/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCCTCTCCAGATACGCTTTTTCCAgcg  <  1:3341962/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgct  <  1:3383752/60‑2 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2922930/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3381151/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3367454/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:334221/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3316063/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3295532/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:327282/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3087667/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3078093/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3035294/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2951066/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3429877/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2918533/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2913884/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2893058/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2891050/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2855548/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2821308/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2808631/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2787644/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1037176/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:537500/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:995050/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:968504/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:954399/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:916873/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:905603/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:89363/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:855525/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:824727/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:811592/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:700385/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:685153/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3399690/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:530030/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:500885/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:48057/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:426821/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:386822/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:379265/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3534537/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3516428/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3505754/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:3457240/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2647588/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1407153/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2618250/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1582450/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1575535/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1574933/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1544309/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1512505/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1495385/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1462009/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1439414/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1422881/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1422111/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1595332/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:137020/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1320435/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1288000/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1269957/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:124637/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1184850/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1127994/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1109919/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1074733/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1073842/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2194237/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2587797/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2576720/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2553603/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2491924/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2451059/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2412909/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2388807/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2321853/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1615276/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:2183171/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:19772/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1938143/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1894683/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1822387/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1776892/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1757718/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1752667/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:166079/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1656096/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1654320/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1640128/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgca  <  1:2801131/60‑2 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCAAGATACGCTTTTTCCAgcg  <  1:959012/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCAGCTCCAGATACGCTTTTTCCAgcg  <  1:1252444/60‑1 (MQ=255) gTGAAGGCGCTCCCCCCTACGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg  <  1:1337019/60‑1 (MQ=255) |                                                            GTGAAGGCGCTCCCCCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCG  >  minE/2945986‑2946045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑