Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2983764	2983783	20	38 [0]	[0] 44	creC	sensory histidine kinase in two‑component regulatory system with CreB or PhoB, regulator of the CreBC regulon

CTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGC  >  minE/2983784‑2983844 |                                                             cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3370521/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2734909/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2763100/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2775347/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2864309/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3039516/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3060923/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3103714/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3264371/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3271710/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3348120/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2604180/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3374770/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3485106/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3506439/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3580925/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:3585281/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:41954/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:515693/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:829775/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:914235/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:971345/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2603399/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1025876/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1067144/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1189720/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:121359/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1253415/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1322226/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1391010/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1439993/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1463998/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1472242/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1621627/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1622728/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2104102/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2178136/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2270000/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:236140/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2406740/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2603183/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1002210/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGCGATTCGTAGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:2100234/61‑1 (MQ=255) cTAAAAAGCCCACTGGCGGAGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTccgccgc  <  1:1520433/61‑1 (MQ=255) |                                                             CTAAAAAGCCCACTGGCGGCGATTCGTGGAGCGGCGGAAATTTTACGCGAAGGTCCGCCGC  >  minE/2983784‑2983844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑