Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	359399	359402	4	12 [0]	[0] 76	sfmD	predicted outer membrane export usher protein

GTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAGAA  >  minE/359403‑359458 |                                                        gTTTACGCAAGAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1293331/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGa                    >  1:243098/1‑38 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3108785/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3430679/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3386027/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3362892/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3356374/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3330291/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3325089/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3297148/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3240242/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3216853/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3539640/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3047683/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2974948/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2974938/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2899717/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2873004/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2824436/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2711459/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:631696/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:978703/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:957491/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:913039/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:892834/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:884037/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:870165/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:79817/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:658982/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2661524/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:620764/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:552129/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:393299/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:372992/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:368898/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3612724/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:356553/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:3558281/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1486914/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1773220/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1742222/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1705226/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1666851/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1646199/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1600447/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1546758/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1505682/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1499449/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2605894/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:146047/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1410369/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1406120/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:121026/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1199224/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1192390/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1183612/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1173112/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2203606/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1096024/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2479937/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2464663/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2404803/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2397586/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2362336/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2338012/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2244669/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2232975/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2175436/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2067564/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2018439/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2010582/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1987425/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:1883913/1‑54 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGAAATCATTCAGaa  >  1:3519643/1‑56 (MQ=255) gTTTACGCAACAATGGTTCCTGGAACTA‑TTTCGCGGAAATGGATATCATTCAg    >  1:3422281/1‑53 (MQ=255) gTTTACGCAACAAAGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAg    >  1:2190369/1‑54 (MQ=255) |                                                        GTTTACGCAACAATGGTTCCTGGAACTATTTTCGCGGAAATGGATATCATTCAGAA  >  minE/359403‑359458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑