Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	373919	373970	52	22 [0]	[0] 61	fepE	regulator of length of O‑antigen component of lipopolysaccharide chains

GTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCGGAACT  >  minE/373971‑374031 |                                                             gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGTGGTCACTGACGTTGCgg      >  1:2213273/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:431220/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3086901/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3097537/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3151735/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3186618/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3204447/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3205542/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3364616/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3373370/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3378809/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3381656/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3382066/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3385072/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3443028/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3455496/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3503982/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:3005271/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:567941/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:573440/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:584988/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:585484/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:58611/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:769041/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:782107/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:787777/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:848968/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:886546/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:889200/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:894831/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:923233/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2266528/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1133017/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1156403/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1375369/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1378309/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1429931/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1475886/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1606141/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1640986/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1742439/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2062877/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2092085/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2191345/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2203942/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:1074154/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2304922/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:230695/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2370840/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2415307/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2418846/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2454540/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2481039/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:260750/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2655979/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2800212/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2826512/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2847300/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2926813/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCgg      >  1:2955511/1‑57 (MQ=255) gTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCGGAAca  >  1:673337/1‑60 (MQ=255) |                                                             GTGCAGACGGTATTGAACGCAAACTGGAAATAGAAAAAGCGGTCACTGACGTTGCGGAACT  >  minE/373971‑374031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑