Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	488149	488275–488190	42–127	15 [1]	[0] 54	lysQ/nadA	tRNA‑Lys/quinolinate synthase, subunit A

GCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACA  >  minE/488276‑488337 |                                                              gcCCTAAAGGCGCTTTTTTGCTATTTAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:2812134/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCGGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:248013/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCGCTTTGTAAACCTGATGACa  >  1:3062148/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACtt                  >  1:206109/1‑46 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGt               >  1:3204207/1‑49 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaa             >  1:2321361/1‑51 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTaa             >  1:227247/1‑51 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTa              >  1:860377/1‑50 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTATACCTGATGACa  >  1:746207/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtgatgaga  >  1:1155117/1‑60 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:333325/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:2530853/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:2751276/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:3179653/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1150835/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:3340359/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:3454041/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:457239/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:607563/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:759969/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:977395/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1456274/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1901306/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:2207775/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1457560/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1628097/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1398017/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1577267/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCtg        >  1:1475836/1‑56 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCt         >  1:1970315/1‑55 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:453952/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:3482054/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:1424168/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:699766/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:743921/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:749027/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:759536/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:1385081/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:1362359/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:893500/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:1094454/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:3603633/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:3511553/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:3504284/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:3485406/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:3371736/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:1510622/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:1598895/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:2992843/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:2837790/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:271771/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:2686827/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACa  >  1:2191645/1‑62 (MQ=255) gcCCTAAAGGCGCTTTTTTGCGATTCAGGCATCCTCAATTTCACt                   >  1:3041664/1‑45 (MQ=255) |                                                              GCCCTAAAGGCGCTTTTTTGCTATTCAGGCATCCTCAATTTCACTTTGTAAACCTGATGACA  >  minE/488276‑488337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑