Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	540593	540620	28	16 [0]	[0] 37	rhtA	threonine and homoserine efflux system

GACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCC  >  minE/540621‑540682 |                                                              gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAGCAGCGcc  <  1:1692618/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGGGcc  <  1:1592770/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3417436/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2673645/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2721366/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2948797/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2974184/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3042453/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3046297/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3070367/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3127782/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3137088/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2467828/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3442601/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3445862/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:3449158/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:397915/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:611926/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:644601/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:774470/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2015874/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1133548/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1145510/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1193753/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1464469/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1521540/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1727494/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1811673/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:1855466/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:251701/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2092831/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:212943/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2327893/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2334263/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:246778/62‑1 (MQ=255) gACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:112854/62‑1 (MQ=255) gACAAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGcc  <  1:2161846/62‑1 (MQ=255) |                                                              GACCAAGAACCGCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCC  >  minE/540621‑540682

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑