Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	555234	555372	139	16 [0]	[0] 33	[moeB]	[moeB]

ATGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCTTCCATTGC  >  minE/555373‑555434 |                                                              aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCCGCATTTTGATCGCt          >  1:1408197/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGc           >  1:3641421/1‑53 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:3297547/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2517205/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2605313/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2687775/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2972420/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2983145/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:3108283/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:3197141/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:3232783/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:121753/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:3305484/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:3449796/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:3603189/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:588751/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:698069/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2284571/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2260295/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2157723/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:2061263/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1987604/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1978259/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1780345/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1718301/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1696891/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1645716/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1443924/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1325441/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCt          >  1:1149817/1‑54 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCTTCCATTGc  >  1:2390588/1‑62 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCTTCCATTGc  >  1:517626/1‑62 (MQ=255) aTGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATAGc           >  1:1814497/1‑53 (MQ=255) |                                                              ATGACGATTTTCCCGCTGGCCGGTTTGCCATAACCTGCCAGCATTTTGATCGCTTCCATTGC  >  minE/555373‑555434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑