Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	34471	34540	70	17 [0]	[0] 74	caiC	predicted crotonobetaine CoA ligase:carnitine CoA ligase

ATCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTC  >  minE/34541‑34602 |                                                              aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCg                             >  1:2516068/1‑35 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGc    >  1:1290371/1‑60 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGc    >  1:1563083/1‑60 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCt   >  1:809372/1‑61 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCt   >  1:284407/1‑61 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3171337/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3427943/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3405348/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:33828/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3376479/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3353490/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3264060/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3236260/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3227590/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:395073/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3149660/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:313813/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:312722/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3084856/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:3028028/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:301739/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:605780/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:847409/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:79505/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:787283/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:722549/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:712842/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:692294/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:68550/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:66304/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:385879/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:567939/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:565575/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:562427/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:518190/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:498494/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:471584/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2846942/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:392736/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1326134/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1828594/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1783313/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1709190/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1702468/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1684065/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1427025/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1405390/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1338213/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1934868/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1296482/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1188950/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1175984/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1173604/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1126973/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1093790/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1083804/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1068006/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:268145/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2861720/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:1040389/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2770828/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2770125/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2739611/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2731778/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2701159/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2697293/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2958479/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:258776/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2533372/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2402155/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:240021/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2377799/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2291953/1‑62 (MQ=255) aTCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTc  >  1:2258428/1‑62 (MQ=255) |                                                              ATCCCATAAGACGTCAGCAAGCGAACGCCGAAGCGTTCACAAAACGCATCTTTTTCCTGCTC  >  minE/34541‑34602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑