Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	643583	643599	17	9 [0]	[0] 9	ompF	outer membrane porin 1a (Ia;b;F)

TGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTA  >  minE/643600‑643638 |                                       tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:105878/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:1153510/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:1156921/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:1228377/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:1553882/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:2273908/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:2546409/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:3294569/39‑1 (MQ=255) tGTTATAGATTTCTGCAGCGTTTGCAGTACCTGctacta  <  1:856693/39‑1 (MQ=255) |                                       TGTTATAGATTTCTGCAGCGTTTGCAGTACCTGCTACTA  >  minE/643600‑643638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑