Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	946822	946825	4	35 [0]	[0] 34	ddpA	D‑Ala‑D‑Ala transporter subunit

CAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAC  >  minE/946826‑946887 |                                                              cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:3296877/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2377752/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2408002/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2546433/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2578185/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2581572/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2966395/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2991461/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:3128930/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2160936/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:3327382/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:3477179/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:378516/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:599389/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:636803/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:801384/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:806687/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1599666/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1146173/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1146180/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1396449/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1397374/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1499232/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1522814/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1524471/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1586236/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1074134/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:160443/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1710157/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1915267/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1928398/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:1938991/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2072913/62‑1 (MQ=255) cAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAc  <  1:2102117/62‑1 (MQ=255) |                                                              CAGCGCATCGGCAATGTCAATGTCGCCACGGGAGAGCTGCAGGCGACGGGAGGCACTTTCAC  >  minE/946826‑946887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑