Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1038648	1038697	50	44 [0]	[0] 100	rsxE	predicted inner membrane NADH‑quinone reductase

TCACTGGACGCCAGCCGAGATCCGCATTCCCATTTA  >  minE/1038698‑1038733 |                                    tCACTGGACGCCAGCCGAGATCCGCATTCCCAttt   >  1:336739/1‑35 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCAttt   >  1:1529880/1‑35 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3150131/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3535809/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:351840/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3490892/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3477842/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3320121/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3305428/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3301991/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3300605/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3300227/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3241205/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3623297/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3140521/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3115214/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3077188/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3066721/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2973022/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2969546/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2904035/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2836244/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2807828/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:278532/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2746817/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2731067/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:740782/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:984467/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:974452/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:971979/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:968053/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:960226/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:943700/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:93164/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:908211/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:892803/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:87865/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:796114/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:771075/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3590045/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:719562/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:716869/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:712484/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:658831/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:64915/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:64777/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:616928/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:409909/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3648489/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:3644407/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2696918/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1431158/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1776499/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1769356/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1726392/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1639760/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1637556/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1628609/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1625873/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1623400/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1550991/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1529456/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1504233/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1488364/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1833043/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1355202/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1353636/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1260115/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1228632/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:122785/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1218680/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1208566/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1195036/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1161267/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1141804/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1131496/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2392808/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2668012/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2651222/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2640957/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2640439/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2631757/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2598847/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2596592/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2584159/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2583857/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2553989/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2483724/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1024088/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:230029/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2232768/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2229713/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:214688/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2082374/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2048066/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:2003274/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1978246/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1941419/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1871210/1‑36 (MQ=255) tCACTGGACGCCAGCCGAGATCCGCATTCCCATTTa  >  1:1840005/1‑36 (MQ=255) |                                    TCACTGGACGCCAGCCGAGATCCGCATTCCCATTTA  >  minE/1038698‑1038733

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑