Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1173107	1173243	137	20 [0]	[0] 37	topB	DNA topoisomerase III

CTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTT  >  minE/1173244‑1173295 |                                                    cTTTCGCCACCACAGGCAGTGGCGTTCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2461167/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:3190514/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2323235/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2712563/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2776541/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2796780/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2910080/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2921047/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:300381/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2055501/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:3279488/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:3365847/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:3399672/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:3558714/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:356549/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:3620947/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:484039/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:610847/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1270872/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1077061/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1083160/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1097470/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1109746/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1121213/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1129344/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1173096/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1176930/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:125895/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1008942/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1382063/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1496643/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1549525/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1563952/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1637762/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1878967/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:1977173/52‑1 (MQ=255) cTTTCGCCACCACAGGCAGTAGCGTGCCGTCGTTTTCTTCATCGCGCTCttt  <  1:2644102/52‑1 (MQ=255) |                                                    CTTTCGCCACCACAGGCAGTGGCGTGCCGTCGTTTTCTTCATCGCGCTCTTT  >  minE/1173244‑1173295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑