Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1176813	1176832	20	26 [0]	[0] 25	sppA	protease IV

CACTATTCGCCAGGCGAAGGACGACCGCAATATCAC  >  minE/1176833‑1176868 |                                    cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:3152629/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:989943/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:95488/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:894570/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:893940/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:86754/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:658769/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:545570/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:441712/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:3608307/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:3600756/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:3513824/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:3167245/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:1388717/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:3132653/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:3108744/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:2748413/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:2744502/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:2530859/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:245909/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:2389315/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:2388624/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:2310764/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:2245974/36‑1 (MQ=255) cacTATTCGCCAGGCGAAGGACGACCGCAATATCAc  <  1:1780143/36‑1 (MQ=255) |                                    CACTATTCGCCAGGCGAAGGACGACCGCAATATCAC  >  minE/1176833‑1176868

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑