Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1183303	1183326	24	75 [0]	[0] 59	mipA	scaffolding protein for murein synthesizing machinery

TCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTC  >  minE/1183327‑1183388 |                                                              tCGCTTTGAAGTAAAGCTGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1118467/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGTTAATTGAAAGTTTATc               >  1:1329081/1‑49 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTc      >  1:3135281/1‑58 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCAtt   >  1:389781/1‑61 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCAtt   >  1:3594199/1‑61 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCAtt   >  1:751940/1‑61 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCAtt   >  1:3220717/1‑61 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3213085/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3596805/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3593697/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3490060/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3489100/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3239460/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:412609/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3088243/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3086540/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:308618/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:368847/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:3079727/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:453840/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:508507/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:549178/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:585150/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:624767/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:711686/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:751073/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:843212/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:854402/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:914795/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:980106/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2894/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1023630/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:129903/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1410979/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1460319/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1513545/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:157170/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1655002/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1664658/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:169401/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1898836/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1938736/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2030926/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2041004/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2074059/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2339602/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2378643/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2543305/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2557151/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2594772/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:263868/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2754928/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2795578/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:2846370/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTc  >  1:1006103/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGAGTCATTc  >  1:39046/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGAAATTGAAAGTTTAt                >  1:530159/1‑48 (MQ=255) tCGCTTTGAAGTAAAGCGGAGACCAGTAAGCGGTAATTGAAAGTTTATCAGTTGCGTCATTc  >  1:1685112/1‑62 (MQ=255) tCGCTTTGAAGTAAAGCCGCGACCTGTAAGCGGTAATAGAAAGTTTATCCGTTGCGTCa     >  1:262565/1‑59 (MQ=255) |                                                              TCGCTTTGAAGTAAAGCGGCGACCAGTAAGCGGTAATTGAAAGTTTATCCGTTGCGTCATTC  >  minE/1183327‑1183388

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑