Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1261439	1261440	2	55 [0]	[0] 25	torY	TMAO reductase III (TorYZ), cytochrome c‑type subunit

TTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATG  >  minE/1261441‑1261502 |                                                              ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCAt   >  1:3589488/1‑61 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCAt   >  1:1004110/1‑61 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:2102635/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:878173/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:551198/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:3622877/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:3411041/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:321030/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:3177142/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:3116905/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:307488/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:2923131/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:2686624/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:24645/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1978745/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1952150/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1884042/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:155669/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1546583/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1402126/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1242573/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1195982/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1135578/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1080269/1‑62 (MQ=255) ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATg  >  1:1071286/1‑62 (MQ=255) |                                                              TTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATG  >  minE/1261441‑1261502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑