Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1359180	1359219	40	17 [0]	[0] 49	yehC	predicted periplasmic pilin chaperone

CACTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAT  >  minE/1359220‑1359258 |                                       cacTCTGACTTTCTAAGGGGGCTATCATAATAGTTTCAt  <  1:1435324/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3589140/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2622711/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2673996/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2805229/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3139945/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3141058/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3144280/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3200531/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3397045/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3406773/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3451279/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3474703/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3577707/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2508741/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:3612531/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:361438/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:430359/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:434843/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:520145/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:63979/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:833606/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:846205/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:851977/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:932784/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1990447/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1056430/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:115882/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1228908/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1345532/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1347517/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1416155/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1479533/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1693086/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1794590/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1818582/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1956495/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2583254/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1996011/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2212001/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2242687/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2277253/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2281957/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2370502/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2374754/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2380833/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2411030/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:2416642/39‑1 (MQ=255) cacTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAt  <  1:1011489/39‑1 (MQ=255) |                                       CACTCTGACTTTCTAAGGGGGCAATCATAATAGTTTCAT  >  minE/1359220‑1359258

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑