Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1389508	1389509	2	52 [0]	[0] 62	yeiH	conserved inner membrane protein

CAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAT  >  minE/1389510‑1389560 |                                                   cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:359626/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2757579/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2826918/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2837322/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2983883/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3017147/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3035530/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3073218/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3074367/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3187863/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3195545/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3233783/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3360861/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3370541/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3566972/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:3586759/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2698309/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:392356/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:415548/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:562447/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:58206/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:601004/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:62363/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:642662/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:72932/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:796574/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:796977/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:806058/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:857346/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:87833/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:96590/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1744599/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1033470/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1131017/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1155874/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1192370/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1203372/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1280797/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1280983/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1321393/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:140480/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1408799/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1413833/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1580470/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1660871/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1003428/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1811371/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1834076/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1849963/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:188633/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2216178/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2343919/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2355216/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:240855/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2450636/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2511566/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:260156/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAt  <  1:2649668/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGGTTGCCATCTTGTGCAt  <  1:2557144/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCAGTGGTTTGCCATCTTGTTCAt  <  1:1757368/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACTATTCAGTGGTTTGCCATCTTGTTCAt  <  1:133246/51‑1 (MQ=255) cAGCGGCGAGAAAAGCAAAATCACAATTCCGTGGTTTGCCATCTTGTTCAt  <  1:1734877/51‑1 (MQ=255) |                                                   CAGCGGCGAGAAAAGCAAAATCACTATTCCGTGGTTTGCCATCTTGTTCAT  >  minE/1389510‑1389560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑