Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1443313	1443401	89	32 [0]	[0] 24	rcsD	phosphotransfer intermediate protein in two‑component regulatory system with RcsBC

CGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGC  >  minE/1443402‑1443463 |                                                              cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGaaaa                     >  1:1573127/1‑43 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAg   >  1:1545916/1‑61 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAg   >  1:2063668/1‑61 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAg   >  1:2074146/1‑61 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAg   >  1:2807021/1‑61 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:2141607/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:88939/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:554841/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:425472/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:361996/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:3486795/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:3130987/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:3063600/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:2867925/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:2865423/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:2725763/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:1041345/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:176386/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:1734232/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:1517194/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:1418239/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:1241113/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:1088053/1‑62 (MQ=255) cgcAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGc  >  1:1047855/1‑62 (MQ=255) |                                                              CGCAGGAAGAGGTGACAGAATCGCCTCTGGGCGGAGATGAAAATGCGCAACTCCATGCCAGC  >  minE/1443402‑1443463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑