Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1455929	1455931	3	19 [0]	[0] 40	yfaQ	hypothetical protein

AATATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAC  >  minE/1455932‑1455991 |                                                            aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:3047231/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2809775/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2830261/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2924319/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2941954/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2966368/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:299517/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:3000572/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:3008414/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:3033010/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2789987/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:3050630/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:3071428/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:3635241/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:467736/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:643823/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:793922/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:818171/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:916889/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:973388/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1930933/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1055731/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1178386/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1226754/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1371534/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1453234/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1554222/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1654892/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1826958/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1849440/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:1011289/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2113882/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2116935/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2239808/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2456917/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2458917/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2698817/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2719283/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2728275/60‑1 (MQ=255) aaTATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAc  <  1:2741808/60‑1 (MQ=255) |                                                            AATATACGCCGCCACTGCGGCATTTTTTTCGCCAGCCAGGCTTTCGCTTTGGGTAATAAC  >  minE/1455932‑1455991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑