Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1523684	1523747	64	36 [0]	[1] 24	flk	predicted flagella assembly protein

AACGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATGG  >  minE/1523747‑1523809  |                                                              aaCGGGGGAACCCAGCAAACAGATCTGG‑AATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:776832/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:2276098/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:957571/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:922555/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:561913/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:3571902/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:3503972/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:334281/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:2888663/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:2820930/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:2547018/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:2383732/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1010434/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:2236616/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:2053198/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1984173/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1884875/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1870529/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1458721/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1193640/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1176148/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:114733/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATgg  <  1:1092361/62‑1 (MQ=255)  aCGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGGGAAAGATgg  <  1:1532596/62‑1 (MQ=255)  |                                                              AACGGGGGAACCCAGCAAACAGATCTGGCAATCGATGCTGGAACTTTCCGGGGTGAAAGATGG  >  minE/1523747‑1523809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑