Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1527152	1527165	14	53 [0]	[0] 29	trmC	fused 5‑methylaminomethyl‑2‑thiouridine forming enzyme methyltransferase and FAD‑dependent demodification enzyme

CGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGA  >  minE/1527166‑1527225 |                                                            cGCTTTCCTGAGCATCCAGATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2040590/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGTGAGCGGCTTCGGCACCGGa  <  1:1814768/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2319702/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:954182/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:715670/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:489333/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:407761/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:3603845/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:3426990/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:3131792/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:3125614/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:303132/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2708188/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2683328/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2623209/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2567797/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2457047/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:101339/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:2090275/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1994134/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1930498/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:188417/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1870322/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1754868/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1724444/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:157859/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1500868/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1243246/60‑1 (MQ=255) cGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGa  <  1:1160593/60‑1 (MQ=255) |                                                            CGCTTTCCTGAGCATCCACATCCTCTGTTTGTGGTAGCAGAGAGCGGCTTCGGCACCGGA  >  minE/1527166‑1527225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑