Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1785524	1785524	1	15 [0]	[0] 100	recN	recombination and repair protein

GCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGCC  >  minE/1785525‑1785585 |                                                             gCGGTAACGAAACGTCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1974382/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGGGCGCATTACACCAACAACGcc  >  1:2239506/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCa                  >  1:1609758/1‑45 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTa               >  1:629371/1‑48 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACCCCAACAACGcc  >  1:281422/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCACCAACGcc  >  1:1172061/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2773584/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3154838/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3087061/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3028456/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3017164/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3001831/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2953383/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2926179/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2900824/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2852126/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2781587/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3372470/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2767818/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2645877/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2612/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2554250/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2549356/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2545117/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2510241/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2478486/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2471346/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2455577/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:566391/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:958996/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:936188/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:912064/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:847244/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:827252/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:8172/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:8086/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:77484/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:761590/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:674374/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:633779/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3282205/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:518506/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:516765/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:406336/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3647872/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3549302/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3516684/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3483286/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3423758/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3399496/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:3387486/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2417117/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1406295/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1844454/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1832866/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1776051/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1775544/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1752848/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1705111/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:167877/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1622361/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1592268/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1525075/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1475293/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1876609/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1383648/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1325349/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:131891/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1273119/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1250380/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1248803/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:115213/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1146842/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1108806/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1098945/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1061012/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:213762/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1016234/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2407260/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2406455/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:238154/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2347074/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2326456/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2300754/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2224543/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2193800/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2156806/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2151572/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2448946/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2113674/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2113106/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:2111138/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1987463/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1971322/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1945521/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:194307/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1939840/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:192167/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGcc  >  1:1921060/1‑61 (MQ=255) gCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGc   >  1:3078250/1‑60 (MQ=255) |                                                             GCGGTAACGAAACATCATCAGCAGGCACTGGAAATCGCGCGCGCATTACACCAACAACGCC  >  minE/1785525‑1785585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑