Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2110722	2110728	7	46 [0]	[0] 17	agaD	N‑acetylgalactosamine‑specific enzyme IID component of PTS

CGGTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCT  >  minE/2110660‑2110721                                                              | cggTTTTACGTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1106793/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGTACGACAAACCGGGCt  <  1:379119/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:636070/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:101993/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:441121/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:509432/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:547027/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:55539/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:571025/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:578731/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:581376/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:598182/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:610425/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:437545/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:651697/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:653085/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:674807/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:726653/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:785871/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:802297/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:804502/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:89532/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:96627/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:143549/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1073498/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1146829/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1178676/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1182325/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1183488/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1187299/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:1189438/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:420559/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:149547/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:225016/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:252576/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:306625/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:317742/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:365436/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:382633/62‑1 (MQ=255) cggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:387472/62‑1 (MQ=255) cggTTTTACCTGGGAGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:190009/62‑1 (MQ=255)  ggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:715897/61‑1 (MQ=255)  ggTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:89983/61‑1 (MQ=255)     tttACCTGGGCGATGTTGCCGATCCTGAAAAATATTTATAAGGACGACAAACCGGGCt  <  1:1148404/58‑1 (MQ=255)         ccTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:251193/54‑1 (MQ=255)                    ttGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCt  <  1:672568/43‑1 (MQ=255)                                                              | CGGTTTTACCTGGGCGATGTTGCCGATCCTGAAAAAGATTTATAAGGACGACAAACCGGGCT  >  minE/2110660‑2110721

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑