Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2116648	2116683	36	9 [0]	[0] 7	yraK	predicted fimbrial‑like adhesin protein

ACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTG  >  minE/2116586‑2116647                                                              | aCGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:1035618/62‑1 (MQ=255) aCGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:234127/62‑1 (MQ=255) aCGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:318191/62‑1 (MQ=255) aCGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:52036/62‑1 (MQ=255) aCGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:940029/62‑1 (MQ=255)  cGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:324925/61‑1 (MQ=255)  cGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:326314/61‑1 (MQ=255)   gggAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTg  <  1:475017/60‑1 (MQ=255)            ccTCTGCAACGCTAAGTAGCACTAACTGGCAATAAGCCTGTTCCTGCTATg  <  1:1185090/51‑1 (MQ=255)                                                              | ACGGGAGTTTACCTCTGCAACGCTAAGTAGCACTAACTGGCAATACGCCTGTTCCTGCTCTG  >  minE/2116586‑2116647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑