Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2239888	2239903	16	35 [0]	[0] 59	zraS	sensory histidine kinase in two‑component regulatory system with ZraR

CAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTG  >  minE/2239826‑2239887                                                              | cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:810722/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:571874/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:582058/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:582082/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:616333/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:685391/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:696816/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:700993/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:72969/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:535963/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:846614/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:89957/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:931024/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:936951/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:97740/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:985104/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:993513/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:22765/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:1038698/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:1120939/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:1125964/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:1163241/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:1178289/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:184504/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:195474/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:1016376/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:301442/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:358788/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:372430/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:400156/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:401934/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:441899/62‑1 (MQ=255) cAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTATGGGTTg  <  1:251560/62‑1 (MQ=255)  aaGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:1199597/61‑1 (MQ=255)   aGACCGTCGCCAGGGCGTAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTg  <  1:566004/60‑1 (MQ=255)                                                              | CAAGACCGTCGCCAGGGCGAAGAGGATAATCAGGGTATTGCGCTTTTCCCCACTCTGGGTTG  >  minE/2239826‑2239887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑