Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2656323	2656533	211	41 [0]	[0] 104	glgP	glycogen phosphorylase

GCGTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAT  >  minE/2656261‑2656322                                                              | gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTGTTCAt  <  1:259550/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:755282/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:1109260/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:502557/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:518618/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:539076/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:560251/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:604761/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:708074/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:716272/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:494273/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:809411/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:80966/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:811054/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:854904/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:85575/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:878198/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:947388/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:97760/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:998391/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:4114/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:1118189/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:1137003/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:1144447/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:1146879/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:145473/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:177357/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:177653/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:194864/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:209929/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:2350/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:238312/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:247472/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:338236/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:348978/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:355510/62‑1 (MQ=255) gcgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:460968/62‑1 (MQ=255)  cgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCTCATTATTCAt  <  1:90354/61‑1 (MQ=255)  cgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTGAt  <  1:688413/61‑1 (MQ=255)  cgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:76566/61‑1 (MQ=255)  cgTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAt  <  1:185786/61‑1 (MQ=255)                                                              | GCGTGAATATTTTTGGCGGTAAGGCGGCTTCGGCCTATTACATGGCGAAGCACATTATTCAT  >  minE/2656261‑2656322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑