Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 312421 312494 74 88 [0] [0] 36 acrB multidrug efflux system protein

CGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATATCCTCC  >  minE/312359‑312420
                                                             |
cGCCCGACGTACGGCTGATTGCATCTTTCATATTCACCGCCACGTAGTCGGAGATAtcctcc  <  1:985035/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACTTAGGCGGAGATAtcctcc  <  1:1040307/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGTGATAtcctcc  <  1:1021790/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:754321/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:414932/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:742808/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:71856/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:677382/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:668600/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:642599/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:635624/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:608138/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:607088/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:591195/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:582297/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:576678/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:566421/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:516228/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:457552/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1011582/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:435946/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:439104/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:858712/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:98390/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:976153/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:950463/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:935695/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:928770/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:91797/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:907054/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:892318/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:863689/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:768499/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:830838/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:82564/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:821043/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:806123/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:788748/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:781853/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:775673/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:769489/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1141040/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:164748/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:125462/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:396143/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1202195/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1200175/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:117495/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1166904/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1164635/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1151961/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:102079/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1133150/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1117292/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1065247/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1115345/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:107803/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1107247/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1104539/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1099151/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1079450/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:314347/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:371508/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:360847/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1057178/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:357509/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:355512/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:32480/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:320848/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:306824/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:380371/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:1042099/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:286277/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:279823/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:263674/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:250141/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:193556/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGGCGGAGATAtcctcc  <  1:742659/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGACACGTAGTCGGAGATAtcctcc  <  1:1150456/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCATATTCCCCGCCACGTAGTCGGAGATAtcctcc  <  1:62316/62‑1 (MQ=255)
cGCCCGACGTACGGCTGATGGCATCTTTCACATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:623518/62‑1 (MQ=255)
   ccGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:755825/59‑1 (MQ=255)
        gTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:526319/54‑1 (MQ=255)
        gTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:392905/54‑1 (MQ=255)
                       tCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:876785/39‑1 (MQ=255)
                       tCTTTCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:428322/39‑1 (MQ=255)
                         tttCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:922676/37‑1 (MQ=255)
                          ttCATATTCGCCGCCACGTAGTCGGAGATAtcctcc  <  1:862149/36‑1 (MQ=255)
                                                             |
CGCCCGACGTACGGCTGATGGCATCTTTCATATTCGCCGCCACGTAGTCGGAGATATCCTCC  >  minE/312359‑312420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: