Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1146645	1146673	29	25 [0]	[1] 9	chbR	DNA‑binding transcriptional dual regulator

GCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACC  >  minE/1146583‑1146644                                                              | gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:472480/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:754768/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:697254/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:614660/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:56624/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:554961/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:535463/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:525945/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:520563/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:51106/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:432932/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:360557/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:30341/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:924439/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:165439/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:132228/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:953088/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:1118914/62‑1 (MQ=255) gCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:1007910/62‑1 (MQ=255)  ctctTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:985496/61‑1 (MQ=255)  ctctTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:819861/61‑1 (MQ=255)  ctctTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:748147/61‑1 (MQ=255)  ctctTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:220714/61‑1 (MQ=255)               aTCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:1112091/48‑1 (MQ=255)                            tACTTTTCAGCCACTGCGGTACATCATCAATCAcc  <  1:1193229/35‑1 (MQ=255)                                                              | GCTCTTTATCATGCATCTTTTCTACCGTACTTTTCAGCCACTGCGGTACATCATCAATCACC  >  minE/1146583‑1146644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑