Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1329444	1329450	7	24 [0]	[0] 22	wcaJ	predicted UDP‑glucose lipid carrier transferase

GGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAC  >  minE/1329382‑1329443                                                              | gtcaccacCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:677888/60‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:667859/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:836361/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:826584/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:825287/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:823883/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:805330/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:80348/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:766776/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:755581/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:692447/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:568367/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:564564/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:362808/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:340659/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:326917/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:254143/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:214848/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:185512/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:162226/62‑1 (MQ=255) ggCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:1140620/62‑1 (MQ=255) ggCACCACCGCTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:1088918/62‑1 (MQ=255)  gCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:682791/61‑1 (MQ=255)  gCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAc  <  1:359431/61‑1 (MQ=255)                                                              | GGCACCACCGGTACGCCGTTCATCTCTTCGAGGCGTGAATGGAGAATGTTGAAGGTAAAGAC  >  minE/1329382‑1329443

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑