Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	99941	99967	27	15 [0]	[0] 23	hofC	assembly protein in type IV pilin biogenesis, transmembrane protein

GAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACC  >  minE/99880‑99940                                                             | gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:1150729/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:1181268/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:190413/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:27022/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:503062/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:741052/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:785573/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:797074/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:797237/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:798623/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:9045/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:91959/61‑1 (MQ=255) gAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:968639/61‑1 (MQ=255) gAAGGTCTTAAAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:108976/61‑1 (MQ=255)        ttATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAaccacc  <  1:903099/54‑1 (MQ=255)                                                             | GAAGGTCTTATAGATAGCGGCAAACTCCGGCAGAACAAAATGCAGCATTGCCACAACCACC  >  minE/99880‑99940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑